strviper

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strviper [2017/05/04 20:24] mikaelstrviper [2018/03/20 09:19] mikael
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 If you are interested in knowing more about STRViper, please contact Minh Duc Cao (minhduc.cao@gmail.com). If you find STRViper useful for your research, please cite it in your publications.  If you are interested in knowing more about STRViper, please contact Minh Duc Cao (minhduc.cao@gmail.com). If you find STRViper useful for your research, please cite it in your publications. 
  
-Cao MD, Tasker E, Willadsen K, Imelfort M, Vishwanathan S, Sureshkumar S, Balasubramanian S and Bodén M (2014) Inferring Short Tandem Repeat Variation from Paired-End Short Reads, Nucleic Acids Research. Feb;42(3):e16. DOI: [[http://dx.doi.org/10.1093/nar/gkt1313|10.1093/nar/gkt1313]].+Cao MD, Tasker E, Willadsen K, Imelfort M, Vishwanathan S, Sureshkumar S, Balasubramanian S and Bodén M (2014) Inferring Short Tandem Repeat Variation from Paired-End Short Reads, //Nucleic Acids Research//. Feb;42(3):e16. DOI: [[http://dx.doi.org/10.1093/nar/gkt1313|10.1093/nar/gkt1313]].
  
 === Installation === === Installation ===
  
-  1. Download the strviper package.+  1. Download the strviper package: http://bioinf.scmb.uq.edu.au:8080/STRViper/strviper.tar.gz
   2. Unzip the package to $PATH_TO_STRV (i.e., tar zxvf strviper.tar.gz)   2. Unzip the package to $PATH_TO_STRV (i.e., tar zxvf strviper.tar.gz)
   3. Add $PATH_TO_STRV/scripts to you $PATH   3. Add $PATH_TO_STRV/scripts to you $PATH
  • strviper.txt
  • Last modified: 2018/03/20 09:48
  • by mikael