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research:woo_jun_shim [2018/03/24 14:39] – chris | research:woo_jun_shim [2019/05/03 10:24] (current) – chris | ||
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E-mail: woo.shim@uqconnect.edu.au \\ | E-mail: woo.shim@uqconnect.edu.au \\ | ||
+ | LinkedIn: [[https:// | ||
+ | Twitter: [[https:// | ||
- | Woo Jun is currently pursuing PhD under supervision of Assoc. Prof. Mikael Boden and Dr. Nathan Palpant. His current research work centres around epigenetic regulation of genes that drive cell fate, which can be summarised in a threefold approach. | + | |
+ | Woo Jun is currently pursuing PhD under supervision of Assoc. Prof. Mikael Boden (SCMB, UQ) and Dr. Nathan Palpant | ||
* Identifying key epigenetic features associated with regulation of cell identity genes. | * Identifying key epigenetic features associated with regulation of cell identity genes. | ||
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* Understanding epigenetic gene regulation by integrating those epigenetic features. | * Understanding epigenetic gene regulation by integrating those epigenetic features. | ||
- | * Devising computational methods to provide insights into regulatory roles of genes. | + | * Devising computational methods to infer genetic regulators |
- | Leveraging abundance of public datasets (e.g. from ROADMAP and ENCODE projects), Woo Jun studies histone modifications, | + | Leveraging abundance of public datasets (e.g. from ROADMAP and ENCODE projects), Woo Jun studies histone modifications, |
- | Woo Jun has Master of Bioinformatics (UQ, 2016) and Bachelor degrees in Pharmacy (UQ, 2008) and Biomedical science (Adelaide, 2004). He is a registered pharmacist and worked in Australia for 7 years before coming back to Uni. With knowledge and experience in pharmacy and biology, Woo Jun is interested in applying bioinformatics methods to tackle broad biological and clinical | + | Woo Jun has Master of Bioinformatics (UQ, 2016) and Bachelor degrees in Pharmacy (UQ, 2008) and Biomedical science (Adelaide, 2004). He is a registered pharmacist and worked in Australia for 7 years before coming back to Uni. He worked extensively in the community pharmacy and performed more than 150 home medicines reviews (HMRs) as an accredited consultant pharmacist. With knowledge and experience in pharmacy and biology, Woo Jun is interested in applying bioinformatics methods to tackle broad biological and clinical |
- | **Publications** | + | ** Publications ** |
- | Cell identity genes are frequently and distinctively associated with broad H3K27me3 domains | + | Shim, WJ., Piper, M., Palpant, N., Boden, M. (2018) |
+ | Shim, WJ., Sinniah, E., Xu, J., Vitrinel, B., Alexanian, A., Andreoletti, | ||
- | **Conferences** | + | |
+ | **Conference talk** | ||
+ | |||
+ | Cell identity genes are predicted by the absence of broad H3K27me3 domains. ABACBS National Conference, Melbourne, 2018. | ||
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+ | **Conference poster** | ||
Sortilin localisation in the rat retina during early postnatal | Sortilin localisation in the rat retina during early postnatal | ||
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**Awards** | **Awards** | ||
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+ | 2018 ABACBS Conference Travel Award. | ||
2017 SCMB Master of molecular biology and master of bioinformatics prize 2016 (UQ, SCMB), awarded to the graduating student with the highest GPA of their class. | 2017 SCMB Master of molecular biology and master of bioinformatics prize 2016 (UQ, SCMB), awarded to the graduating student with the highest GPA of their class. |