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evoss [2018/07/19 22:48] – [Research Project] seanevoss [2018/07/19 22:58] sean
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 ==== Evolu-sec package ==== ==== Evolu-sec package ====
-Evolu-sec package is a part of research project as “Modelling the evolution of protein secondary structure: a new phylogenetic metric suitable for assessing structural similarity”.\\ +<html> 
-Evolu-sec package contains phylogenetic analysis tools based on an evolutionary model of secondary structure [**center**]. +<p class=MsoNormal style='text-align:justify;text-justify:inter-ideograph'><span 
-Analysis focus on phylogenetic tree inference [**left**], evolutionary distance estimation [**top**], and ancestral secondary structure reconstruction [**bottom and right**]. +class=SpellE><span lang=EN-GB>Evolu</span></span><span lang=EN-GB>-sec package 
-The research project abstract is provided in next session. +is a part of research project as “Modelling the evolution of protein secondary 
-The dataset for the model development and the software can be accessed in the [[http://bioinf.scmb.uq.edu.au/evoss#supplementary_data|“Supplementary Data”]] session.+structure: a new phylogenetic metric suitable for assessing structural 
 +similarity”.<o:p></o:p></span></p> 
 +<p class=MsoNormal style='text-align:justify;text-justify:inter-ideograph'><span 
 +class=SpellE><span lang=EN-GB>Evolu</span></span><span lang=EN-GB>-sec package 
 +contains phylogenetic analysis tools based on an evolutionary model of 
 +secondary structure <b style='mso-bidi-font-weight:normal'>[centre, Table 1]</b>
 +Analysis focus on phylogenetic tree inference <b style='mso-bidi-font-weight: 
 +normal'>[left]</b>, evolutionary distance estimation <b style='mso-bidi-font-weight: 
 +normal'>[top]</b>, and ancestral secondary structure reconstruction. <b 
 +style='mso-bidi-font-weight:normal'>[bottom and right]</b>.</span></p> 
 +</html>
  
 +The research project abstract is provided in next session. The dataset for the model development and the software can be accessed in the [[http://bioinf.scmb.uq.edu.au/evoss#supplementary_data|“Supplementary Data”]] session.
 {{:research:evolusec.png}} {{:research:evolusec.png}}
 \\ \\
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 **Abstract**\\ **Abstract**\\
 +<html>
 <p class=MsoNormal style='text-align:justify;text-justify:inter-ideograph'><a <p class=MsoNormal style='text-align:justify;text-justify:inter-ideograph'><a
 name="_GoBack"></a><span lang=EN-GB>Ancestral sequence reconstruction has had name="_GoBack"></a><span lang=EN-GB>Ancestral sequence reconstruction has had
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 relationships that are evolutionarily rooted in structure and not evident in relationships that are evolutionarily rooted in structure and not evident in
 sequence-based phylogenetic analysis.</span></p> sequence-based phylogenetic analysis.</span></p>
 +</html>
 ---- ----
 ==== Supplementary Data ==== ==== Supplementary Data ====
-Supplementary data for "**Modelling the evolution of protein secondary structure**" can be downloaded as\\ [[https://cloudstor.aarnet.edu.au/plus/index.php/s/lxuMi0nwv8mRuov|Dataset]] or [[https://cloudstor.aarnet.edu.au/plus/index.php/s/MbQRrsIp1txz27a|Software]], separately.\\+Supplementary data for "**Modelling the evolution of protein secondary structure: a new phylogenetic metric suitable for assessing structural similarity**" can be downloaded as\\ [[https://cloudstor.aarnet.edu.au/plus/index.php/s/lxuMi0nwv8mRuov|Dataset]] or [[https://cloudstor.aarnet.edu.au/plus/index.php/s/MbQRrsIp1txz27a|Software]], separately.\\
 \\ \\
 Package may be downloaded as single one archive as\\ [[https://cloudstor.aarnet.edu.au/plus/index.php/s/UgZbhzrNcgQtMkQ|Full package download]].\\ Package may be downloaded as single one archive as\\ [[https://cloudstor.aarnet.edu.au/plus/index.php/s/UgZbhzrNcgQtMkQ|Full package download]].\\