The Protein Prowler Subcellular Localisation Predictor version 1.2
accepts amino acid sequences, presented in the FASTA format, and determines
the localisation of the protein among the following categories:
- Secretory pathway (presence of a signal peptide SP).
- Mitochondrion (presence of a mitochondrial targeting peptide mTP)
- Chloroplast (presence of a chloroplast transit peptide cTP; only
applicable to plant proteins)
- Other (nucleus, cytoplasmic, or otherwise).
Additionally, the PTS1Prowler application will be run on submitted sequences
to determine whether the sequence is likely to be a peroxisomal matrix protein.