open_projects
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+ | === Investigation of the effect of the circadian rhythm on the genetic control of gene expression === | ||
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+ | Contact: Sonia shah < | ||
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+ | The circadian rhythm reflects the daily cycle of behaviours and metabolic processes organisms exhibit. A 24-hour gene expression pattern occurs at the molecular level, with genes activated either during the day or night. Different tissues all display circadian control, with some more affected than others. Within the liver, for example, 3000 genes are subjected to circadian control. This regulation is orchestrated by a small group of CLOCK genes, establishing feedback loops that result in rhythmic gene expression in every tissue. | ||
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+ | We know that gene expression can be influences by genetics variants, called expression quantitative trait loci (eQTL), and this may be one mechanism linking genetic variants to disease. As a result, large eQTL datasets have been generated to assist in understanding disease mechanisms. However, it remains unknown whether sample collection time can affect eQTL identification. This project therefore aims to identify the possible effects of the circadian rhythm on the genetic control of gene expression using the Genotype-Tissue expression (GTEx) dataset. | ||
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+ | During this project, you will run Python tools such as PEER and tensorQTL to identify eQTL within 49 tissues. You will subsequently investigate the associations identified and follow up on the role of the genes under circadian controls within different phenotypes. | ||
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+ | === Understanding the influence of taste and olfactory perception on eating behaviour and health conditions using big genetic data === | ||
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+ | Contact info: Daniel Hwang < | ||
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+ | Project description: | ||
=== Increasing drug success rate in human clinical trials using genomics === | === Increasing drug success rate in human clinical trials using genomics === |
open_projects.1706756825.txt.gz · Last modified: 2024/02/01 14:07 by project